Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gtf2a1Q99PM3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Rps24-207ENSMUST00000224568 714 ntBASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Gm42706-201ENSMUST00000199733 1910 ntBASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gtf2a1Q99PM3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gtf2a1Q99PM3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gm12922-201ENSMUST00000120626 809 ntBASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf2a1Q99PM3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Spcs1-204ENSMUST00000226782 949 ntBASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2a1Q99PM3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms