Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Gm8344-201ENSMUST00000119813 856 ntBASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Gm18622-201ENSMUST00000219361 595 ntBASIC14.86□□□□□ -0.03
Cstf3Q99LI7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf3Q99LI7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Gm12895-201ENSMUST00000122214 226 ntBASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf3Q99LI7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cstf3Q99LI7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.83□□□□□ -0.03
Cstf3Q99LI7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cstf3Q99LI7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cstf3Q99LI7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cstf3Q99LI7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.83□□□□□ -0.03
Cstf3Q99LI7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Gm7506-201ENSMUST00000207758 815 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms