Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.66■□□□□ 0.42
Rfc4Q99J62 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.65■□□□□ 0.42
Rfc4Q99J62 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.65■□□□□ 0.42
Rfc4Q99J62 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc4Q99J62 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rfc4Q99J62 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Gm25287-201ENSMUST00000103846 110 ntBASIC17.64■□□□□ 0.41
Rfc4Q99J62 Gm22918-201ENSMUST00000103855 110 ntBASIC17.64■□□□□ 0.41
Rfc4Q99J62 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.64■□□□□ 0.41
Rfc4Q99J62 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.64■□□□□ 0.41
Rfc4Q99J62 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc4Q99J62 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm14722-201ENSMUST00000118943 689 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm10499-201ENSMUST00000174094 934 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.63■□□□□ 0.41
Rfc4Q99J62 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.63■□□□□ 0.41
Rfc4Q99J62 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Mir6977-201ENSMUST00000184960 64 ntBASIC17.62■□□□□ 0.41
Rfc4Q99J62 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.62■□□□□ 0.41
Rfc4Q99J62 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms