Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd1Q99J36 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Gm22697-201ENSMUST00000175194 63 ntBASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Gm18101-201ENSMUST00000215769 548 ntBASIC13.69□□□□□ -0.22
Thumpd1Q99J36 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd1Q99J36 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Efs-202ENSMUST00000227037 2540 ntBASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd1Q99J36 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd1Q99J36 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms