Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.06■□□□□ 0.48
Col20a1Q923P0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Rprl2-201ENSMUST00000157150 290 ntBASIC18.05■□□□□ 0.48
Col20a1Q923P0 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.05■□□□□ 0.48
Col20a1Q923P0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Col20a1Q923P0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Gm13365-201ENSMUST00000121188 973 ntBASIC18.04■□□□□ 0.48
Col20a1Q923P0 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.04■□□□□ 0.48
Col20a1Q923P0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col20a1Q923P0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.03■□□□□ 0.48
Col20a1Q923P0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.03■□□□□ 0.48
Col20a1Q923P0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.03■□□□□ 0.48
Col20a1Q923P0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col20a1Q923P0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col20a1Q923P0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Col20a1Q923P0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col20a1Q923P0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Col20a1Q923P0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col20a1Q923P0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Gm44335-201ENSMUST00000196879 141 ntBASIC18.01■□□□□ 0.47
Col20a1Q923P0 Gm44297-201ENSMUST00000198304 141 ntBASIC18.01■□□□□ 0.47
Col20a1Q923P0 Gm44346-201ENSMUST00000198851 141 ntBASIC18.01■□□□□ 0.47
Col20a1Q923P0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms