Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha2Q91Y17 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Celf4-206ENSMUST00000224553 1729 ntBASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha2Q91Y17 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha2Q91Y17 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Gm12260-201ENSMUST00000122447 411 ntBASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Gm17968-201ENSMUST00000194902 784 ntBASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha2Q91Y17 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha2Q91Y17 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms