Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb2Q91Y00 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb2Q91Y00 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb2Q91Y00 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb2Q91Y00 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 App-207ENSMUST00000227737 2827 ntBASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Prob1-201ENSMUST00000097619 3021 ntBASIC16.26■□□□□ 0.19
Pcdhb2Q91Y00 Gm12260-201ENSMUST00000122447 411 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms