Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm8825-201ENSMUST00000182565 998 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm4518-201ENSMUST00000182638 718 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb4Q91XZ6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb4Q91XZ6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhb4Q91XZ6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Gm9172-201ENSMUST00000212092 954 ntBASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb4Q91XZ6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms