Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Gm11764-201ENSMUST00000120221 623 ntBASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb6Q91XZ4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gm9682-201ENSMUST00000197505 556 ntBASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb6Q91XZ4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm11452-201ENSMUST00000122376 690 ntBASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm6550-201ENSMUST00000187574 993 ntBASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb6Q91XZ4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Mir8098-201ENSMUST00000184011 137 ntBASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gm5864-201ENSMUST00000202263 970 ntBASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms