Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga3Q91XY5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga3Q91XY5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga3Q91XY5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga3Q91XY5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga3Q91XY5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm8825-201ENSMUST00000182565 998 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm4518-201ENSMUST00000182638 718 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhga3Q91XY5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhga3Q91XY5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms