Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Gm5587-201ENSMUST00000206270 674 ntBASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SfpqQ8VIJ6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SfpqQ8VIJ6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SfpqQ8VIJ6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SfpqQ8VIJ6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SfpqQ8VIJ6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SfpqQ8VIJ6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm8825-201ENSMUST00000182565 998 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm4518-201ENSMUST00000182638 718 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm45328-201ENSMUST00000210942 917 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfpqQ8VIJ6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfpqQ8VIJ6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfpqQ8VIJ6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfpqQ8VIJ6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SfpqQ8VIJ6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms