Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gm12859-201ENSMUST00000117834 427 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gm11425-201ENSMUST00000119608 498 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gm9396-201ENSMUST00000076703 567 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gm23984-201ENSMUST00000157139 203 ntBASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cspg4Q8VHY0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Cspg4Q8VHY0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Gm13015-201ENSMUST00000118674 204 ntBASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cspg4Q8VHY0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm12138-201ENSMUST00000122180 951 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms