Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh18Q8VHR0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh18Q8VHR0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh18Q8VHR0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh18Q8VHR0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh18Q8VHR0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms