Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.36■□□□□ 0.53
Top1mtQ8R4U6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Gm11452-201ENSMUST00000122376 690 ntBASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.35■□□□□ 0.53
Top1mtQ8R4U6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Top1mtQ8R4U6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Top1mtQ8R4U6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Gm7862-201ENSMUST00000121461 292 ntBASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Gm5682-201ENSMUST00000173402 505 ntBASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Top1mtQ8R4U6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms