Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacnb1Q8R3Z5 Gm14667-201ENSMUST00000119448 1350 ntBASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gm17983-201ENSMUST00000190766 594 ntBASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacnb1Q8R3Z5 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Gm25406-201ENSMUST00000157599 105 ntBASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 AC155266.1-201ENSMUST00000220762 904 ntBASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacnb1Q8R3Z5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Gm12644-201ENSMUST00000119935 606 ntBASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Gm28917-201ENSMUST00000187294 237 ntBASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Ighv10-4-201ENSMUST00000193702 299 ntBASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacnb1Q8R3Z5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms