Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup58Q8R332 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup58Q8R332 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.45■□□□□ 0.22
Nup58Q8R332 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup58Q8R332 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup58Q8R332 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup58Q8R332 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Gm25406-201ENSMUST00000157599 105 ntBASIC16.44■□□□□ 0.22
Nup58Q8R332 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup58Q8R332 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.44■□□□□ 0.22
Nup58Q8R332 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Nup58Q8R332 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nup58Q8R332 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup58Q8R332 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.43■□□□□ 0.22
Nup58Q8R332 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nup58Q8R332 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Birc2-201ENSMUST00000054878 378 ntBASIC16.43■□□□□ 0.22
Nup58Q8R332 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.43■□□□□ 0.22
Nup58Q8R332 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup58Q8R332 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.43■□□□□ 0.22
Nup58Q8R332 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup58Q8R332 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.42■□□□□ 0.22
Nup58Q8R332 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nup58Q8R332 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup58Q8R332 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Gm14722-201ENSMUST00000118943 689 ntBASIC16.41■□□□□ 0.22
Nup58Q8R332 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.41■□□□□ 0.22
Nup58Q8R332 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.41■□□□□ 0.22
Nup58Q8R332 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.41■□□□□ 0.22
Nup58Q8R332 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms