Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf7Q8R0S1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Atf7Q8R0S1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Gm5682-201ENSMUST00000173402 505 ntBASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf7Q8R0S1 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Sybu-209ENSMUST00000228639 4113 ntBASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Gm7230-201ENSMUST00000173026 815 ntBASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf7Q8R0S1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf7Q8R0S1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Gm7862-201ENSMUST00000121461 292 ntBASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Gm18489-201ENSMUST00000172565 551 ntBASIC18.08■□□□□ 0.48
Atf7Q8R0S1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atf7Q8R0S1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Gm7222-201ENSMUST00000117512 906 ntBASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms