Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.68■□□□□ 0.1
CopaQ8CIE6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.67■□□□□ 0.1
CopaQ8CIE6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Gm5364-201ENSMUST00000216789 889 ntBASIC15.67■□□□□ 0.1
CopaQ8CIE6 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.67■□□□□ 0.1
CopaQ8CIE6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Gm5867-201ENSMUST00000063197 592 ntBASIC15.67■□□□□ 0.1
CopaQ8CIE6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CopaQ8CIE6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CopaQ8CIE6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.65■□□□□ 0.1
CopaQ8CIE6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Gm6550-201ENSMUST00000187574 993 ntBASIC15.65■□□□□ 0.1
CopaQ8CIE6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopaQ8CIE6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms