Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Gm14701-201ENSMUST00000117156 348 ntBASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab11fip3Q8CHD8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Gm15920-201ENSMUST00000118998 402 ntBASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab11fip3Q8CHD8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab11fip3Q8CHD8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab11fip3Q8CHD8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab11fip3Q8CHD8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab11fip3Q8CHD8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm13365-201ENSMUST00000121188 973 ntBASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rab11fip3Q8CHD8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rab11fip3Q8CHD8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Gm11745-201ENSMUST00000121669 448 ntBASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms