Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc2Q8CG48 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Smc2Q8CG48 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Gm8097-201ENSMUST00000117903 829 ntBASIC17.59■□□□□ 0.41
Smc2Q8CG48 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.59■□□□□ 0.41
Smc2Q8CG48 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.59■□□□□ 0.41
Smc2Q8CG48 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.59■□□□□ 0.41
Smc2Q8CG48 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc2Q8CG48 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Smc2Q8CG48 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc2Q8CG48 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.58■□□□□ 0.4
Smc2Q8CG48 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc2Q8CG48 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc2Q8CG48 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.57■□□□□ 0.4
Smc2Q8CG48 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.57■□□□□ 0.4
Smc2Q8CG48 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc2Q8CG48 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smc2Q8CG48 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 BC037039-201ENSMUST00000192003 2205 ntBASIC17.56■□□□□ 0.4
Smc2Q8CG48 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Gm15358-201ENSMUST00000119249 520 ntBASIC17.56■□□□□ 0.4
Smc2Q8CG48 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms