Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nup88Q8CEC0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Gm13418-201ENSMUST00000119097 944 ntBASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.11■□□□□ 0.49
Nup88Q8CEC0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup88Q8CEC0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.1■□□□□ 0.49
Nup88Q8CEC0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup88Q8CEC0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup88Q8CEC0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup88Q8CEC0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup88Q8CEC0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup88Q8CEC0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Nup88Q8CEC0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup88Q8CEC0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup88Q8CEC0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup88Q8CEC0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nup88Q8CEC0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms