Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Gm28659-201ENSMUST00000188013 759 ntBASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.5■□□□□ 0.23
Vcpip1Q8CDG3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcpip1Q8CDG3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Gm25745-201ENSMUST00000174945 133 ntBASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.48■□□□□ 0.23
Vcpip1Q8CDG3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vcpip1Q8CDG3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms