Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Gm25911-201ENSMUST00000157621 56 ntBASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Gm18246-201ENSMUST00000221023 728 ntBASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Prpf31Q8CCF0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf31Q8CCF0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Gm17968-201ENSMUST00000194902 784 ntBASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf31Q8CCF0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Gm10499-201ENSMUST00000174094 934 ntBASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Prpf31Q8CCF0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Gm27702-201ENSMUST00000184512 56 ntBASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf31Q8CCF0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms