Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smim4Q8C1Q6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smim4Q8C1Q6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 BC037039-201ENSMUST00000192003 2205 ntBASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Gm27742-201ENSMUST00000184667 60 ntBASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smim4Q8C1Q6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Mir7071-201ENSMUST00000184847 69 ntBASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim4Q8C1Q6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms