Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trub1Q8C0D0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trub1Q8C0D0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trub1Q8C0D0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.83■□□□□ 0.12
Trub1Q8C0D0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trub1Q8C0D0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Gm5682-201ENSMUST00000173402 505 ntBASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trub1Q8C0D0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trub1Q8C0D0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.8■□□□□ 0.12
Trub1Q8C0D0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trub1Q8C0D0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms