Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trank1Q8BV79 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.03□□□□□ -0.32
Trank1Q8BV79 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trank1Q8BV79 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.02□□□□□ -0.32
Trank1Q8BV79 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.02□□□□□ -0.32
Trank1Q8BV79 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trank1Q8BV79 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.02□□□□□ -0.33
Trank1Q8BV79 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.02□□□□□ -0.33
Trank1Q8BV79 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.02□□□□□ -0.33
Trank1Q8BV79 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trank1Q8BV79 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Gm18018-201ENSMUST00000198273 408 ntBASIC13.01□□□□□ -0.33
Trank1Q8BV79 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms