Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup54Q8BTS4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm13597-201ENSMUST00000121239 375 ntBASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nup54Q8BTS4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nup54Q8BTS4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Gm5264-201ENSMUST00000190584 848 ntBASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.66■□□□□ 0.1
Nup54Q8BTS4 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.66■□□□□ 0.1
Nup54Q8BTS4 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup54Q8BTS4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup54Q8BTS4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms