Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4Q8BQZ5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Gm25406-201ENSMUST00000157599 105 ntBASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf4Q8BQZ5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Gm6257-201ENSMUST00000163864 910 ntBASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4Q8BQZ5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Mzt1-203ENSMUST00000227948 952 ntBASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms