Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Gm7284-201ENSMUST00000131667 944 ntBASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Gm27704-201ENSMUST00000185094 107 ntBASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ckap4Q8BMK4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ckap4Q8BMK4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ckap4Q8BMK4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ckap4Q8BMK4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ckap4Q8BMK4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms