Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Asic1-205ENSMUST00000228185 1818 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Gm5566-201ENSMUST00000116118 459 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Gm2451-201ENSMUST00000199447 999 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Gm10290-201ENSMUST00000200451 999 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Shd-206ENSMUST00000225145 998 ntBASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col16a1Q8BLX7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
Col16a1Q8BLX7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col16a1Q8BLX7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col16a1Q8BLX7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col16a1Q8BLX7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Gm12138-201ENSMUST00000122180 951 ntBASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col16a1Q8BLX7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Gm4875-201ENSMUST00000118257 786 ntBASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Gm14042-201ENSMUST00000120139 833 ntBASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col16a1Q8BLX7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Gm25857-201ENSMUST00000082788 129 ntBASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Gm5479-201ENSMUST00000160578 435 ntBASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Col16a1Q8BLX7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col16a1Q8BLX7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Gm6745-201ENSMUST00000199216 526 ntBASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col16a1Q8BLX7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms