Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Gm13312-201ENSMUST00000119631 718 ntBASIC16.47■□□□□ 0.23
Nop53Q8BK35 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.47■□□□□ 0.23
Nop53Q8BK35 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nop53Q8BK35 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.46■□□□□ 0.23
Nop53Q8BK35 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nop53Q8BK35 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nop53Q8BK35 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nop53Q8BK35 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nop53Q8BK35 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.46■□□□□ 0.22
Nop53Q8BK35 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nop53Q8BK35 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.45■□□□□ 0.22
Nop53Q8BK35 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.45■□□□□ 0.22
Nop53Q8BK35 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Nop53Q8BK35 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.45■□□□□ 0.22
Nop53Q8BK35 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Rprl3-201ENSMUST00000157400 290 ntBASIC16.44■□□□□ 0.22
Nop53Q8BK35 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nop53Q8BK35 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms