Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nod1Q8BHB0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.1■□□□□ 0.17
Nod1Q8BHB0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Gm16198-201ENSMUST00000118766 670 ntBASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nod1Q8BHB0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nod1Q8BHB0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nod1Q8BHB0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Nod1Q8BHB0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.08■□□□□ 0.17
Nod1Q8BHB0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nod1Q8BHB0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nod1Q8BHB0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Gm14722-201ENSMUST00000118943 689 ntBASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Gm10154-201ENSMUST00000084445 354 ntBASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.08■□□□□ 0.16
Nod1Q8BHB0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nod1Q8BHB0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.07■□□□□ 0.16
Nod1Q8BHB0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.07■□□□□ 0.16
Nod1Q8BHB0 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms