Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Atg4dQ8BGV9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Atg4dQ8BGV9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.27□□□□□ -0.13
Atg4dQ8BGV9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
Atg4dQ8BGV9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms