Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nucks1Q80XU3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nucks1Q80XU3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.42■□□□□ 0.22
Nucks1Q80XU3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.42■□□□□ 0.22
Nucks1Q80XU3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nucks1Q80XU3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nucks1Q80XU3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nucks1Q80XU3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms