Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim36Q80WG7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Gm27459-201ENSMUST00000184860 107 ntBASIC14.84□□□□□ -0.03
Trim36Q80WG7 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.84□□□□□ -0.03
Trim36Q80WG7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim36Q80WG7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim36Q80WG7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim36Q80WG7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gm10052-201ENSMUST00000168019 960 ntBASIC14.82□□□□□ -0.04
Trim36Q80WG7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.82□□□□□ -0.04
Trim36Q80WG7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.82□□□□□ -0.04
Trim36Q80WG7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim36Q80WG7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Gm43347-201ENSMUST00000200226 580 ntBASIC14.81□□□□□ -0.04
Trim36Q80WG7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms