Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Gm8825-201ENSMUST00000182565 998 ntBASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf40bQ80W14 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf40bQ80W14 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm25948-201ENSMUST00000175334 112 ntBASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf40bQ80W14 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf40bQ80W14 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms