Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp38Q80UU2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Mir5126-201ENSMUST00000175513 77 ntBASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Gm27741-201ENSMUST00000185060 237 ntBASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Rpp38Q80UU2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gm12350-201ENSMUST00000121208 462 ntBASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Mir5131-201ENSMUST00000175426 93 ntBASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.29■□□□□ 0.04
Rpp38Q80UU2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Rpp38Q80UU2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp38Q80UU2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms