Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpap1Q80TE0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 AC132467.2-202ENSMUST00000227726 559 ntBASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rpap1Q80TE0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Gm6912-201ENSMUST00000117218 544 ntBASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 AL593843.1-201ENSMUST00000195891 145 ntBASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpap1Q80TE0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Gm14928-201ENSMUST00000120198 477 ntBASIC23.56■■□□□ 1.36
Rpap1Q80TE0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rpap1Q80TE0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Gm6218-201ENSMUST00000219812 628 ntBASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Gm37166-201ENSMUST00000195473 2474 ntBASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpap1Q80TE0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Gm12859-201ENSMUST00000117834 427 ntBASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpap1Q80TE0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Cdk7-205ENSMUST00000225990 1159 ntBASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Gm6263-201ENSMUST00000120029 1342 ntBASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rpap1Q80TE0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms