Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.03■□□□□ 0.16
Prpf38bQ80SY5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Gm36967-201ENSMUST00000193814 266 ntBASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf38bQ80SY5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.02■□□□□ 0.15
Prpf38bQ80SY5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf38bQ80SY5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Prpf38bQ80SY5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf38bQ80SY5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Prpf38bQ80SY5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms