Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp3Q7TNH6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp3Q7TNH6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp3Q7TNH6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Nphp3Q7TNH6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp3Q7TNH6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Gm18246-201ENSMUST00000221023 728 ntBASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Nphp3Q7TNH6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp3Q7TNH6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Gm10499-201ENSMUST00000174094 934 ntBASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp3Q7TNH6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Nphp3Q7TNH6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Gm5177-201ENSMUST00000183092 997 ntBASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp3Q7TNH6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms