Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm13365-201ENSMUST00000121188 973 ntBASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm11745-201ENSMUST00000121669 448 ntBASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm8396-201ENSMUST00000057361 823 ntBASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx58Q6Q899 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx58Q6Q899 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.9■□□□□ 0.62
Ddx58Q6Q899 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx58Q6Q899 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.89■□□□□ 0.62
Ddx58Q6Q899 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx58Q6Q899 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx58Q6Q899 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Gm14701-201ENSMUST00000117156 348 ntBASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Rprl2-201ENSMUST00000157150 290 ntBASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx58Q6Q899 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms