Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Gm14859-201ENSMUST00000117752 357 ntBASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Gm29518-201ENSMUST00000190858 372 ntBASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Gm17808-201ENSMUST00000200859 894 ntBASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Dhx40Q6PE54 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.07■□□□□ 0.32
Dhx40Q6PE54 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dhx40Q6PE54 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Gm45328-201ENSMUST00000210942 917 ntBASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Grk6-207ENSMUST00000225925 2769 ntBASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dhx40Q6PE54 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm7284-201ENSMUST00000131667 944 ntBASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms