Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gm13312-201ENSMUST00000119631 718 ntBASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gm17808-201ENSMUST00000200859 894 ntBASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd3Q6P9Z1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Gm29518-201ENSMUST00000190858 372 ntBASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd3Q6P9Z1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Gm6659-201ENSMUST00000174752 547 ntBASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd3Q6P9Z1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd3Q6P9Z1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd3Q6P9Z1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd3Q6P9Z1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Smarcd3Q6P9Z1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms