Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a2Q64739 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a2Q64739 Gm11918-201ENSMUST00000121660 179 ntBASIC18.34■□□□□ 0.53
Col11a2Q64739 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.34■□□□□ 0.53
Col11a2Q64739 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col11a2Q64739 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a2Q64739 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a2Q64739 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col11a2Q64739 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a2Q64739 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.33■□□□□ 0.53
Col11a2Q64739 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.33■□□□□ 0.53
Col11a2Q64739 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a2Q64739 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.33■□□□□ 0.52
Col11a2Q64739 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.33■□□□□ 0.52
Col11a2Q64739 Gm43630-201ENSMUST00000201550 776 ntBASIC18.33■□□□□ 0.52
Col11a2Q64739 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.33■□□□□ 0.52
Col11a2Q64739 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Col11a2Q64739 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.33■□□□□ 0.52
Col11a2Q64739 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.33■□□□□ 0.52
Col11a2Q64739 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a2Q64739 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Col11a2Q64739 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Col11a2Q64739 Gm9229-201ENSMUST00000222777 126 ntBASIC18.32■□□□□ 0.52
Col11a2Q64739 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.32■□□□□ 0.52
Col11a2Q64739 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.32■□□□□ 0.52
Col11a2Q64739 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a2Q64739 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col11a2Q64739 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Col11a2Q64739 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col11a2Q64739 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col11a2Q64739 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Gm28760-201ENSMUST00000185995 736 ntBASIC18.31■□□□□ 0.52
Col11a2Q64739 Gm10766-202ENSMUST00000194123 606 ntBASIC18.31■□□□□ 0.52
Col11a2Q64739 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.31■□□□□ 0.52
Col11a2Q64739 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.31■□□□□ 0.52
Col11a2Q64739 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col11a2Q64739 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.31■□□□□ 0.52
Col11a2Q64739 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col11a2Q64739 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Col11a2Q64739 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col11a2Q64739 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm45098-201ENSMUST00000207179 657 ntBASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col11a2Q64739 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm9797-201ENSMUST00000052902 613 ntBASIC18.3■□□□□ 0.52
Col11a2Q64739 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col11a2Q64739 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Col11a2Q64739 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col11a2Q64739 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col11a2Q64739 Gm17150-201ENSMUST00000165577 381 ntBASIC18.29■□□□□ 0.52
Col11a2Q64739 Mir6420-201ENSMUST00000185032 102 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms