Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sycp1Q62209 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sycp1Q62209 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Sycp1Q62209 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.24■□□□□ 0.35
Sycp1Q62209 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44357-201ENSMUST00000195897 142 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm19658-201ENSMUST00000196231 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44367-201ENSMUST00000196836 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44350-201ENSMUST00000197197 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44390-201ENSMUST00000197533 144 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44313-201ENSMUST00000198018 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44486-201ENSMUST00000198508 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44314-201ENSMUST00000199263 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44394-201ENSMUST00000199558 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44484-201ENSMUST00000199873 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44466-201ENSMUST00000200264 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Gm44359-201ENSMUST00000200671 138 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.24■□□□□ 0.35
Sycp1Q62209 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sycp1Q62209 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sycp1Q62209 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Sycp1Q62209 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.23■□□□□ 0.35
Sycp1Q62209 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.23■□□□□ 0.35
Sycp1Q62209 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sycp1Q62209 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sycp1Q62209 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sycp1Q62209 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sycp1Q62209 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.22■□□□□ 0.35
Sycp1Q62209 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.22■□□□□ 0.35
Sycp1Q62209 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.22■□□□□ 0.35
Sycp1Q62209 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sycp1Q62209 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Sycp1Q62209 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.21■□□□□ 0.35
Sycp1Q62209 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm6376-201ENSMUST00000209407 580 ntBASIC17.21■□□□□ 0.35
Sycp1Q62209 Gm6296-201ENSMUST00000222599 943 ntBASIC17.21■□□□□ 0.35
Sycp1Q62209 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sycp1Q62209 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sycp1Q62209 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sycp1Q62209 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms