Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.85■□□□□ 0.45
Scn9aQ62205 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.85■□□□□ 0.45
Scn9aQ62205 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scn9aQ62205 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn9aQ62205 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Gm45668-201ENSMUST00000211271 493 ntBASIC17.84■□□□□ 0.45
Scn9aQ62205 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.84■□□□□ 0.45
Scn9aQ62205 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.84■□□□□ 0.45
Scn9aQ62205 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.84■□□□□ 0.45
Scn9aQ62205 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn9aQ62205 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.84■□□□□ 0.45
Scn9aQ62205 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn9aQ62205 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn9aQ62205 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scn9aQ62205 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn9aQ62205 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.83■□□□□ 0.44
Scn9aQ62205 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scn9aQ62205 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn9aQ62205 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn9aQ62205 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.82■□□□□ 0.44
Scn9aQ62205 Gm9908-201ENSMUST00000211534 448 ntBASIC17.82■□□□□ 0.44
Scn9aQ62205 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.82■□□□□ 0.44
Scn9aQ62205 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.82■□□□□ 0.44
Scn9aQ62205 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn9aQ62205 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.82■□□□□ 0.44
Scn9aQ62205 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn9aQ62205 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn9aQ62205 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn9aQ62205 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms