Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Zic4Q61467 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Zic4Q61467 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Zic4Q61467 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Gm14722-201ENSMUST00000118943 689 ntBASIC12.44□□□□□ -0.42
Zic4Q61467 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.44□□□□□ -0.42
Zic4Q61467 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Zic4Q61467 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.44□□□□□ -0.42
Zic4Q61467 Gm27011-201ENSMUST00000182352 972 ntBASIC12.44□□□□□ -0.42
Zic4Q61467 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Zic4Q61467 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Zic4Q61467 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Zic4Q61467 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Zic4Q61467 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.43□□□□□ -0.42
Zic4Q61467 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.43□□□□□ -0.42
Zic4Q61467 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Gm12008-201ENSMUST00000117791 755 ntBASIC12.43□□□□□ -0.42
Zic4Q61467 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Gm10653-202ENSMUST00000139570 835 ntBASIC12.43□□□□□ -0.42
Zic4Q61467 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.43□□□□□ -0.42
Zic4Q61467 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Zic4Q61467 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zic4Q61467 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.42□□□□□ -0.42
Zic4Q61467 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.42□□□□□ -0.42
Zic4Q61467 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.42□□□□□ -0.42
Zic4Q61467 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.42□□□□□ -0.42
Zic4Q61467 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.42□□□□□ -0.42
Zic4Q61467 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.42□□□□□ -0.42
Zic4Q61467 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Zic4Q61467 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zic4Q61467 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms