Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm13418-201ENSMUST00000119097 944 ntBASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.99□□□□□ -0.01
Vsx2Q61412 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.99□□□□□ -0.01
Vsx2Q61412 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.99□□□□□ -0.01
Vsx2Q61412 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx2Q61412 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.98□□□□□ -0.01
Vsx2Q61412 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vsx2Q61412 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vsx2Q61412 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Vsx2Q61412 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Gm7862-201ENSMUST00000121461 292 ntBASIC14.98□□□□□ -0.01
Vsx2Q61412 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.98□□□□□ -0.01
Vsx2Q61412 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.98□□□□□ -0.01
Vsx2Q61412 Gm18195-201ENSMUST00000207604 706 ntBASIC14.98□□□□□ -0.01
Vsx2Q61412 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.98□□□□□ -0.01
Vsx2Q61412 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.98□□□□□ -0.01
Vsx2Q61412 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.98□□□□□ -0.01
Vsx2Q61412 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx2Q61412 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Vsx2Q61412 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gm6257-201ENSMUST00000163864 910 ntBASIC14.97□□□□□ -0.01
Vsx2Q61412 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.97□□□□□ -0.01
Vsx2Q61412 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gm18622-201ENSMUST00000219361 595 ntBASIC14.97□□□□□ -0.01
Vsx2Q61412 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.97□□□□□ -0.01
Vsx2Q61412 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vsx2Q61412 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx2Q61412 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vsx2Q61412 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vsx2Q61412 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vsx2Q61412 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.96□□□□□ -0.01
Vsx2Q61412 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vsx2Q61412 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vsx2Q61412 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms