Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scnn1aQ61180 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Gm16026-204ENSMUST00000162652 683 ntBASIC17.58■□□□□ 0.4
Scnn1aQ61180 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.58■□□□□ 0.4
Scnn1aQ61180 Gm43474-201ENSMUST00000196415 774 ntBASIC17.58■□□□□ 0.4
Scnn1aQ61180 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.58■□□□□ 0.4
Scnn1aQ61180 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scnn1aQ61180 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scnn1aQ61180 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Gm43125-201ENSMUST00000201724 730 ntBASIC17.57■□□□□ 0.4
Scnn1aQ61180 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scnn1aQ61180 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.56■□□□□ 0.4
Scnn1aQ61180 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scnn1aQ61180 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.55■□□□□ 0.4
Scnn1aQ61180 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.55■□□□□ 0.4
Scnn1aQ61180 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scnn1aQ61180 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Gm6973-201ENSMUST00000117080 721 ntBASIC17.54■□□□□ 0.4
Scnn1aQ61180 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
Scnn1aQ61180 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.54■□□□□ 0.4
Scnn1aQ61180 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.54■□□□□ 0.4
Scnn1aQ61180 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.54■□□□□ 0.4
Scnn1aQ61180 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scnn1aQ61180 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms