Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lama5Q61001 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lama5Q61001 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lama5Q61001 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.02□□□□□ -0.32
Lama5Q61001 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.02□□□□□ -0.32
Lama5Q61001 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lama5Q61001 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lama5Q61001 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lama5Q61001 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lama5Q61001 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.02□□□□□ -0.33
Lama5Q61001 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.02□□□□□ -0.33
Lama5Q61001 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lama5Q61001 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lama5Q61001 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lama5Q61001 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.02□□□□□ -0.33
Lama5Q61001 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.02□□□□□ -0.33
Lama5Q61001 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Lama5Q61001 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lama5Q61001 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.01□□□□□ -0.33
Lama5Q61001 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.01□□□□□ -0.33
Lama5Q61001 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lama5Q61001 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm27920-201ENSMUST00000183953 96 ntBASIC13.01□□□□□ -0.33
Lama5Q61001 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lama5Q61001 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm11543-201ENSMUST00000120758 370 ntBASIC13.01□□□□□ -0.33
Lama5Q61001 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.01□□□□□ -0.33
Lama5Q61001 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.01□□□□□ -0.33
Lama5Q61001 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lama5Q61001 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Gm5303-201ENSMUST00000117943 1252 ntBASIC13□□□□□ -0.33
Lama5Q61001 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13□□□□□ -0.33
Lama5Q61001 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13□□□□□ -0.33
Lama5Q61001 AC158529.1-201ENSMUST00000223618 239 ntBASIC13□□□□□ -0.33
Lama5Q61001 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Gm42901-201ENSMUST00000197735 3171 ntBASIC13□□□□□ -0.33
Lama5Q61001 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13□□□□□ -0.33
Lama5Q61001 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13□□□□□ -0.33
Lama5Q61001 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lama5Q61001 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13□□□□□ -0.33
Lama5Q61001 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Gm42693-201ENSMUST00000196779 631 ntBASIC13□□□□□ -0.33
Lama5Q61001 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lama5Q61001 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lama5Q61001 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Lama5Q61001 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.99□□□□□ -0.33
Lama5Q61001 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.99□□□□□ -0.33
Lama5Q61001 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.99□□□□□ -0.33
Lama5Q61001 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Lama5Q61001 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lama5Q61001 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms